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ccdc69.L coiled-coil domain containing 69 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100158406, updated on 4-Nov-2024

Summary

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Official Symbol
ccdc69.L
Official Full Name
coiled-coil domain containing 69 L homeolog
Primary source
Xenbase:XB-GENE-6252750
Locus tag
XELAEV_18016847mg
See related
EnsemblRapid:ENSXLAG00005023689 AllianceGenome:Xenbase:XB-GENE-6252750
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ccdc69-a; ccdc69-b
Summary
Orthologous to human CCDC69 (coiled-coil domain containing 69). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ccdc69.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (21496078..21521901, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (9908851..9934737)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene gastrotropin Neighboring gene gastrotropin Neighboring gene CD74 molecule L homeolog Neighboring gene GM2 ganglioside activator L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 69-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127849.1 → NP_001121321.1  coiled-coil domain-containing protein 69-B

    See identical proteins and their annotated locations for NP_001121321.1

    Status: PROVISIONAL

    Source sequence(s)
    BC124990
    UniProtKB/Swiss-Prot
    Q08AV7
    UniProtKB/TrEMBL
    A0A974HSA2
    Related
    ENSXLAP00005070159.1, ENSXLAT00005071698.1
    Conserved Domains (1) summary
    COG1196
    Location:29 → 278
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    21496078..21521901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041584807.1 → XP_041440741.1  coiled-coil domain-containing protein 69-B isoform X1

    UniProtKB/Swiss-Prot
    Q08AV7
    UniProtKB/TrEMBL
    A0A1L8GWL2, A0A974HS40
    Related
    ENSXLAP00005070127.1, ENSXLAT00005071661.1
    Conserved Domains (1) summary
    TIGR02168
    Location:42 → 245
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q08AV7.2 GenPept UniProtKB/Swiss-Prot:Q08AV7

Gene LinkOut

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