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rsph3.L radial spoke head 3 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100158369, updated on 18-Sep-2024

Summary

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Official Symbol
rsph3.L
Official Full Name
radial spoke head 3 L homeolog
Primary source
Xenbase:XB-GENE-989664
Locus tag
XELAEV_18027042mg
See related
EnsemblRapid:ENSXLAG00005018717
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rsp3; rshl2; rsph3
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Genomic context

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See rsph3.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (66106826..66124983, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (68560586..68578774)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene synaptotagmin like 3 L homeolog Neighboring gene ezrin L homeolog Neighboring gene T cell activation RhoGTPase activating protein L homeolog Neighboring gene LTV1 ribosome biogenesis factor L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Xenopus radial spoke protein 3 gene is expressed in the multiciliated cells of epidermis and otic vesicles and sequentially in the nephrostomes. Zhang YJ, et al. Dev Genes Evol, 2013 May. PMID 23247584
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. expression of RSP3 mRNA is detected in the entire multiciliated cells of epidermis. At tail-bud stages, it is progressively expressed in the otic vesicles and sequentially expressed in the nephrostomes
    Title: Xenopus radial spoke protein 3 gene is expressed in the multiciliated cells of epidermis and otic vesicles and sequentially in the nephrostomes.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
radial spoke head 3 L homeolog
Names
radial spoke 3 homolog L homeolog
radial spoke head 3 homolog L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127814.1 → NP_001121286.1  radial spoke head 3 L homeolog

    See identical proteins and their annotated locations for NP_001121286.1

    Status: PROVISIONAL

    Source sequence(s)
    BC124929
    UniProtKB/TrEMBL
    A0A974CX59, Q08B05
    Related
    ENSXLAP00005055315.1, ENSXLAT00005056520.1
    Conserved Domains (1) summary
    pfam06098
    Location:45 → 325
    Radial_spoke_3; Radial spoke protein 3

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    66106826..66124983 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018261576.2 → XP_018117065.1  radial spoke head 3 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974CX59, Q08B05
    Related
    ENSXLAP00005055293.1, ENSXLAT00005056492.1
    Conserved Domains (1) summary
    pfam06098
    Location:45 → 325
    Radial_spoke_3; Radial spoke protein 3
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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