PCCB propionyl-CoA carboxylase subunit beta [Sus scrofa (pig)] - Gene

Summary

Official Symbol: PCCBprovided by VGNC
Official Full Name: propionyl-CoA carboxylase subunit betaprovided by VGNC
Primary source: VGNC:VGNC:91210
See related: Ensembl:ENSSSCG00000011653
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression: Ubiquitous expression in kidney (RPKM 100.1), liver (RPKM 60.1) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 13

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	13	NC_010455.5 (77217481..77314779)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	13	NC_010455.4 (84587489..84684642)

Chromosome 13 - NC_010455.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables propionyl-CoA carboxylase activity	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: propionyl-CoA carboxylase beta chain, mitochondrial

Names: PCCase subunit beta; propanoyl-CoA:carbon dioxide ligase subunit beta; propionyl Coenzyme A carboxylase, beta polypeptide; propionyl-CoA carboxylase beta subunit; propionyl-coA carboxylase B

NP_999066.1

EC 6.4.1.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_213901.1 → NP_999066.1 propionyl-CoA carboxylase beta chain, mitochondrial precursor

See identical proteins and their annotated locations for NP_999066.1

Status: PROVISIONAL

Source sequence(s)

AB000886

UniProtKB/Swiss-Prot

P79384

UniProtKB/TrEMBL

A0A8D1M4A9

Related

ENSSSCP00000072200.2, ENSSSCT00000090985.2

Conserved Domains (2) summary

COG4799
Location:37 → 539

MmdA; Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism]

cl23717
Location:63 → 210

crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...