SLC35F5 solute carrier family 35 member F5 [Sus scrofa (pig)] - Gene

Summary

Official Symbol: SLC35F5provided by VGNC
Official Full Name: solute carrier family 35 member F5provided by VGNC
Primary source: VGNC:VGNC:96015
See related: Ensembl:ENSSSCG00000015709
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression: Ubiquitous expression in kidney (RPKM 41.0), liver (RPKM 25.7) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 15

Exon count:: 16

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	15	NC_010457.5 (19924437..19971767, complement)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	15	NC_010457.4 (22547528..22594753, complement)

Chromosome 15 - NC_010457.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in regulation of peptide transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: solute carrier family 35 member F5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001243692.1 → NP_001230621.1 solute carrier family 35 member F5

See identical proteins and their annotated locations for NP_001230621.1

Status: VALIDATED

Source sequence(s)

CK459560, CK464304, EW299401, EW511131, EW554053

UniProtKB/TrEMBL

A0A480Z1K0, A0A4X1SSC8, A0A4X1SSL6, A0A8D1BR11, F1RY25

Related

ENSSSCP00000016649.4, ENSSSCT00000017109.5

Conserved Domains (2) summary

COG0697
Location:246 → 471

RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]

pfam00892
Location:328 → 471

EamA; EamA-like transporter family