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ZDBF2 zinc finger DBF-type containing 2 [ Sus scrofa (pig) ]

Gene ID: 100157334, updated on 17-Aug-2024

Summary

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Official Symbol
ZDBF2provided by VGNC
Official Full Name
zinc finger DBF-type containing 2provided by VGNC
Primary source
VGNC:VGNC:96214
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Low expression observed in reference dataset See more
Orthologs
human mouse all
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Genomic context

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See ZDBF2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 15 NC_010457.5 (109563445..109593858)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 15 NC_010457.4 (121111507..121138902)

Chromosome 15 - NC_010457.5Genomic Context describing neighboring genes Neighboring gene chemerin chemokine-like receptor 2 Neighboring gene peptidyl-prolyl cis-trans isomerase-like 1 pseudogene Neighboring gene uncharacterized LOC106506334 Neighboring gene ADAM metallopeptidase domain 23 Neighboring gene 40S ribosomal protein S23 pseudogene Neighboring gene family with sequence similarity 237 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in epigenetic programming of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in genomic imprinting IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DBF4-type zinc finger-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010457.5 Reference Sscrofa11.1 Primary Assembly

    Range
    109563445..109593858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005672121.3 → XP_005672178.1  DBF4-type zinc finger-containing protein 2 isoform X1

    See identical proteins and their annotated locations for XP_005672178.1

    UniProtKB/TrEMBL
    A0A4X1V152, A0A8D1RNF5

  2. XM_013984418.2 → XP_013839872.1  DBF4-type zinc finger-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A4X1V152, A0A8D1RNF5

  3. XM_021076144.1 → XP_020931803.1  DBF4-type zinc finger-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A4X1V152, A0A8D1RNF5

  4. XM_021076143.1 → XP_020931802.1  DBF4-type zinc finger-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A4X1V152, A0A8D1RNF5

  5. XM_013984420.2 → XP_013839874.1  DBF4-type zinc finger-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A4X1V152, A0A8D1RNF5

  6. XM_013984422.2 → XP_013839876.1  DBF4-type zinc finger-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8D0T4M5
Nucleotide Protein
Heading Accession and Version

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