ECHS1 enoyl-CoA hydratase, short chain 1 [Sus scrofa (pig)] - Gene

Summary

Official Symbol: ECHS1provided by VGNC
Official Full Name: enoyl-CoA hydratase, short chain 1provided by VGNC
Primary source: VGNC:VGNC:103938
See related: Ensembl:ENSSSCG00000038086
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression: Ubiquitous expression in liver (RPKM 517.2), kidney (RPKM 385.9) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 14

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	14	NC_010456.5 (141340320..141348870, complement)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	Unplaced Scaffold	NW_003613571.1 (16553..21885)

Chromosome 14 - NC_010456.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

MARC_26465-26466:1033588705:1 (e-PCR)
- UniSTS:269004

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables enoyl-CoA hydratase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in fatty acid beta-oxidation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: enoyl-CoA hydratase, mitochondrial

Names: enoyl CoA hydratase, short chain, 1, mitochondrial; enoyl Coenzyme A hydratase, short chain, 1, mitochondrial

NP_001177104.1

EC 4.2.1.17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001190175.1 → NP_001177104.1 enoyl-CoA hydratase, mitochondrial

Status: PROVISIONAL

Source sequence(s)

AK232518

UniProtKB/TrEMBL

A0A480JRE1, A0A480U2U2, A0A4X1V758, A0A8D2BI55

Related

ENSSSCP00000040850.2, ENSSSCT00000046483.3

Conserved Domains (1) summary

cl23717
Location:33 → 288

crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...