PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Sus scrofa (pig)] - Gene

Summary

Official Symbol: PAPSS2provided by VGNC
Official Full Name: 3'-phosphoadenosine 5'-phosphosulfate synthase 2provided by VGNC
Primary source: VGNC:VGNC:91173
See related: Ensembl:ENSSSCG00000010437
Gene type: protein coding
RefSeq status: MODEL
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression: Ubiquitous expression in lung (RPKM 8.5), kidney (RPKM 6.4) and 8 other tissues See more
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 14

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	14	NC_010456.5 (99718299..99816346)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	14	NC_010456.4 (108701055..108789588)

Chromosome 14 - NC_010456.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables adenylylsulfate kinase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables sulfate adenylyltransferase (ATP) activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in sulfate assimilation	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

NC_010456.5 Reference Sscrofa11.1 Primary Assembly

Range

99718299..99816346

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021073102.1 → XP_020928761.1 bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform X1

UniProtKB/TrEMBL

A0A480K0E7, A0A4X1V5P4, A0A8W4FHX2

Conserved Domains (2) summary

cd00517
Location:244 → 612

ATPS; ATP-sulfurylase

cd02027
Location:44 → 194

APSK; Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically "activated" sulfate form important for the assimilation of ...
XM_021073104.1 → XP_020928763.1 bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform X2

UniProtKB/TrEMBL

A0A8D1A907, K7GL09, K7GRA6

Related

ENSSSCP00000030432.3, ENSSSCT00000033551.4

Conserved Domains (2) summary

cd00517
Location:244 → 607

ATPS; ATP-sulfurylase

cd02027
Location:44 → 194

APSK; Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically "activated" sulfate form important for the assimilation of ...
XM_021073105.1 → XP_020928764.1 bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform X3

UniProtKB/TrEMBL

A0A4X1V5Q9

Conserved Domains (2) summary

cd00517
Location:237 → 605

ATPS; ATP-sulfurylase

cd02027
Location:37 → 187

APSK; Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically "activated" sulfate form important for the assimilation of ...