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BAZ2A bromodomain adjacent to zinc finger domain 2A [ Sus scrofa (pig) ]

Gene ID: 100153516, updated on 17-Aug-2024

Summary

Official Symbol
BAZ2Aprovided by VGNC
Official Full Name
bromodomain adjacent to zinc finger domain 2Aprovided by VGNC
Primary source
VGNC:VGNC:85763
See related
Ensembl:ENSSSCG00000000403
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in spleen (RPKM 11.6), lung (RPKM 11.3) and 8 other tissues See more
Orthologs
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Genomic context

See BAZ2A in Genome Data Viewer
Location:
chromosome: 5
Exon count:
34
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (21932527..21983033, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (23610949..23657360, complement)

Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene tubulin alpha chain-like Neighboring gene RNA binding motif single stranded interacting protein 2 Neighboring gene uncharacterized LOC106510301 Neighboring gene ATP synthase F1 subunit beta Neighboring gene prostaglandin E synthase 3

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of rDNA heterochromatin IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
bromodomain adjacent to zinc finger domain protein 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

    Range
    21932527..21983033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001927752.7XP_001927787.6  bromodomain adjacent to zinc finger domain protein 2A isoform X1

    UniProtKB/TrEMBL
    A0A286ZKV9, A0A4X1W942, A0A8D0QEM4
    Conserved Domains (7) summary
    cd05503
    Location:18081904
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:853917
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:555627
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16891735
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14431484
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:405542
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:290518
    E3_binding; e3 binding domain
  2. XM_021092883.1XP_020948542.1  bromodomain adjacent to zinc finger domain protein 2A isoform X5

    UniProtKB/TrEMBL
    A0A8D0VVN4
    Conserved Domains (7) summary
    cd05503
    Location:17791875
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:824888
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:526598
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16601706
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14141455
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:376513
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:261489
    E3_binding; e3 binding domain
  3. XM_021092887.1XP_020948546.1  bromodomain adjacent to zinc finger domain protein 2A isoform X7

    UniProtKB/TrEMBL
    A0A4X1W729
    Conserved Domains (7) summary
    cd05503
    Location:15601656
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:605669
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:307379
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:14411487
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:11951236
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:157294
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:42270
    E3_binding; e3 binding domain
  4. XM_021092884.1XP_020948543.1  bromodomain adjacent to zinc finger domain protein 2A isoform X6

    UniProtKB/TrEMBL
    A0A4X1W968, A0A8D0VVN4
    Conserved Domains (7) summary
    cd05503
    Location:17771873
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:822886
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:524596
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16581704
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14121453
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:374511
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:259487
    E3_binding; e3 binding domain
  5. XM_005663890.3XP_005663947.2  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    UniProtKB/TrEMBL
    A0A4X1W225, A0A8D0QEK4
    Related
    ENSSSCP00000057680.3, ENSSSCT00000055700.3
    Conserved Domains (7) summary
    cd05503
    Location:18061902
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:851915
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:553625
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16871733
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14411482
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:403540
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:288516
    E3_binding; e3 binding domain
  6. XM_021092886.1XP_020948545.1  bromodomain adjacent to zinc finger domain protein 2A isoform X7

    UniProtKB/TrEMBL
    A0A4X1W729
    Conserved Domains (7) summary
    cd05503
    Location:15601656
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:605669
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:307379
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:14411487
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:11951236
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:157294
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:42270
    E3_binding; e3 binding domain
  7. XM_013997625.2XP_013853079.2  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    UniProtKB/TrEMBL
    A0A4X1W225, A0A8D0QEK4
    Conserved Domains (7) summary
    cd05503
    Location:18061902
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:851915
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:553625
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16871733
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14411482
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:403540
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:288516
    E3_binding; e3 binding domain
  8. XM_021092878.1XP_020948537.1  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    UniProtKB/TrEMBL
    A0A4X1W225, A0A8D0QEK4
    Conserved Domains (7) summary
    cd05503
    Location:18061902
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:851915
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:553625
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16871733
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14411482
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:403540
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:288516
    E3_binding; e3 binding domain
  9. XM_021092885.1XP_020948544.1  bromodomain adjacent to zinc finger domain protein 2A isoform X6

    UniProtKB/TrEMBL
    A0A4X1W968, A0A8D0VVN4
    Conserved Domains (7) summary
    cd05503
    Location:17771873
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:822886
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:524596
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16581704
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14121453
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:374511
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:259487
    E3_binding; e3 binding domain
  10. XM_021092888.1XP_020948547.1  bromodomain adjacent to zinc finger domain protein 2A isoform X7

    UniProtKB/TrEMBL
    A0A4X1W729
    Conserved Domains (7) summary
    cd05503
    Location:15601656
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:605669
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:307379
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:14411487
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:11951236
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:157294
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:42270
    E3_binding; e3 binding domain
  11. XM_021092880.1XP_020948539.1  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    UniProtKB/TrEMBL
    A0A4X1W225, A0A8D0QEK4
    Conserved Domains (7) summary
    cd05503
    Location:18061902
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:851915
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:553625
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16871733
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14411482
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:403540
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:288516
    E3_binding; e3 binding domain
  12. XM_021092877.1XP_020948536.1  bromodomain adjacent to zinc finger domain protein 2A isoform X2

    UniProtKB/TrEMBL
    A0A286ZKV9, A0A8D0QEM4
    Related
    ENSSSCP00000032193.3, ENSSSCT00000049648.3
    Conserved Domains (7) summary
    cd05503
    Location:18071903
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:853917
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:555627
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16891735
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14431484
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:405542
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:290518
    E3_binding; e3 binding domain
  13. XM_021092881.1XP_020948540.1  bromodomain adjacent to zinc finger domain protein 2A isoform X4

    UniProtKB/TrEMBL
    A0A8D0QEK4, A0A8D1SDW3
    Conserved Domains (7) summary
    cd05503
    Location:18051901
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:851915
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:553625
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16871733
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14411482
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:403540
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:288516
    E3_binding; e3 binding domain
  14. XM_021092882.1XP_020948541.1  bromodomain adjacent to zinc finger domain protein 2A isoform X4

    UniProtKB/TrEMBL
    A0A8D0QEK4, A0A8D1SDW3
    Conserved Domains (7) summary
    cd05503
    Location:18051901
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:851915
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:553625
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16871733
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:14411482
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26386
    Location:403540
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27351
    Location:288516
    E3_binding; e3 binding domain