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CREG1 cellular repressor of E1A stimulated genes 1 [ Sus scrofa (pig) ]

Gene ID: 100152373, updated on 17-Aug-2024

Summary

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Official Symbol
CREG1provided by VGNC
Official Full Name
cellular repressor of E1A stimulated genes 1provided by VGNC
Primary source
VGNC:VGNC:86989
See related
Ensembl:ENSSSCG00000006308
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in spleen (RPKM 65.6), kidney (RPKM 61.2) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See CREG1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 4 NC_010446.5 (83458358..83469931)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 4 NC_010446.4 (91134162..91145709)

Chromosome 4 - NC_010446.5Genomic Context describing neighboring genes Neighboring gene RCSD domain containing 1 Neighboring gene uncharacterized LOC110260300 Neighboring gene CD247 molecule Neighboring gene POU class 2 homeobox 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein CREG1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010446.5 Reference Sscrofa11.1 Primary Assembly

    Range
    83458358..83469931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001928982.4 → XP_001929017.1  protein CREG1 isoform X1

    UniProtKB/TrEMBL
    A0A4X1VB53, A0A8D0ZH66, A0A8D1BWJ9, F1S268
    Related
    ENSSSCP00000006725.2, ENSSSCT00000006913.5
    Conserved Domains (1) summary
    pfam13883
    Location:50 → 216
    Pyrid_oxidase_2; Pyridoxamine 5'-phosphate oxidase

  2. XM_001928986.5 → XP_001929021.1  protein CREG1 isoform X2

    UniProtKB/TrEMBL
    A0A4X1VB58, A0A8D0ZH66, A0A8D1BWJ9
    Conserved Domains (1) summary
    pfam13883
    Location:50 → 216
    Pyrid_oxidase_2; Pyridoxamine 5'-phosphate oxidase

  3. XM_021089476.1 → XP_020945135.1  protein CREG1 isoform X3

    UniProtKB/TrEMBL
    A0A4X1VB58, A0A8D0ZH66, A0A8D1BWJ9
    Conserved Domains (1) summary
    pfam13883
    Location:50 → 216
    Pyrid_oxidase_2; Pyridoxamine 5'-phosphate oxidase
Nucleotide Protein
Heading Accession and Version

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