ITPK1 inositol-tetrakisphosphate 1-kinase [Sus scrofa (pig)] - Gene

Summary

Official Symbol: ITPK1provided by VGNC
Official Full Name: inositol-tetrakisphosphate 1-kinaseprovided by VGNC
Primary source: VGNC:VGNC:89251
See related: Ensembl:ENSSSCG00000002457
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression: Ubiquitous expression in spleen (RPKM 12.1), ovary (RPKM 10.0) and 8 other tissues See more
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 7

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	7	NC_010449.5 (114361976..114520805, complement)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	7	NC_010449.4 (120970535..121053191, complement)

Chromosome 7 - NC_010449.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables inositol-1,3,4-trisphosphate 5-kinase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables inositol-1,3,4-trisphosphate 6-kinase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables inositol-3,4,5,6-tetrakisphosphate 1-kinase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables magnesium ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in inositol trisphosphate metabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: inositol-tetrakisphosphate 1-kinase

Names: inositol 1,3,4-triphosphate 5/6 kinase

NP_001137164.1

EC 2.7.1.-

EC 2.7.1.134

EC 2.7.1.159

XP_020953644.1

EC 2.7.1.-

EC 2.7.1.134

EC 2.7.1.159

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001143692.2 → NP_001137164.1 inositol-tetrakisphosphate 1-kinase

See identical proteins and their annotated locations for NP_001137164.1

Status: VALIDATED

Source sequence(s)

FJ436390

UniProtKB/TrEMBL

A0A8D0ZQ38, A0A8D2A473, B8XSJ6

Conserved Domains (1) summary

cl17255
Location:1 → 318

CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

NC_010449.5 Reference Sscrofa11.1 Primary Assembly

Range

114361976..114520805 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021097985.1 → XP_020953644.1 inositol-tetrakisphosphate 1-kinase isoform X1

UniProtKB/TrEMBL

A0A8D0ZQ38, A0A8D2A473, B8XSJ6

Related

ENSSSCP00000054214.1, ENSSSCT00000036699.2

Conserved Domains (1) summary

cl17255
Location:1 → 318

CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain