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LOC100151049 Mtp family protein [ Danio rerio (zebrafish) ]

Gene ID: 100151049, updated on 27-Mar-2024

Summary

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Gene symbol
LOC100151049
Gene description
Mtp family protein
See related
Ensembl:ENSDARG00000101785
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (43297534..43309596)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (43701937..43713999)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene gonadotropin releasing hormone receptor 1 Neighboring gene diacylglycerol kinase delta-like Neighboring gene matrilin 1 Neighboring gene sestrin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
Mtp family protein
Names
lysosomal protein transmembrane 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001162527.4 → NP_001155999.1  Mtp family protein

    Status: VALIDATED

    Source sequence(s)
    EH467735, EH483628
    UniProtKB/TrEMBL
    A0A0G2L9C2, A0A8M1NUW5
    Related
    ENSDARP00000141390.1, ENSDART00000168002.3
    Conserved Domains (1) summary
    cl04276
    Location:14 → 214
    Mtp; Golgi 4-transmembrane spanning transporter

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    43297534..43309596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials