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ACADS acyl-CoA dehydrogenase short chain [ Equus caballus (horse) ]

Gene ID: 100147113, updated on 18-Sep-2024

Summary

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Official Symbol
ACADSprovided by VGNC
Official Full Name
acyl-CoA dehydrogenase short chainprovided by VGNC
Primary source
VGNC:VGNC:49519
See related
Ensembl:ENSECAG00000012575
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
SCAD
Orthologs
human mouse all
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Genomic context

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See ACADS in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 8 NC_009151.3 (15867651..15880294, complement)

Chromosome 8 - NC_009151.3Genomic Context describing neighboring genes Neighboring gene HNF1 homeobox A Neighboring gene signal peptide peptidase like 3 Neighboring gene uncharacterized LOC111774871 Neighboring gene unc-119 lipid binding chaperone B Neighboring gene malectin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009151.3 Chromosome 8 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in butyrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short-chain specific acyl-CoA dehydrogenase, mitochondrial
Names
acyl-CoA dehydrogenase, C-2 to C-3 short chain
acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain
short-chain acyl-CoA dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009151.3 Reference EquCab3.0 Primary Assembly

    Range
    15867651..15880294 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023647021.1 → XP_023502789.1  short-chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A3Q2H021, A0A9L0SGI4
    Related
    ENSECAP00000026219.1, ENSECAT00000036437.3
    Conserved Domains (1) summary
    cd01158
    Location:36 → 408
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials