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CHST2 carbohydrate sulfotransferase 2 [ Equus caballus (horse) ]

Gene ID: 100147045, updated on 17-Aug-2024

Summary

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Official Symbol
CHST2provided by VGNC
Official Full Name
carbohydrate sulfotransferase 2provided by VGNC
Primary source
VGNC:VGNC:56725
See related
Ensembl:ENSECAG00000000982
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See CHST2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 16 NC_009159.3 (78542076..78545278)

Chromosome 16 - NC_009159.3Genomic Context describing neighboring genes Neighboring gene progestin and adipoQ receptor family member 9 Neighboring gene U2 snRNP associated SURP domain containing Neighboring gene uncharacterized LOC111768437 Neighboring gene uncharacterized LOC102148858

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009159.3 Chromosome 16 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfur compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009159.3 Reference EquCab3.0 Primary Assembly

    Range
    78542076..78545278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023621060.1 → XP_023476828.1  carbohydrate sulfotransferase 2

    UniProtKB/TrEMBL
    F7CXL1
    Related
    ENSECAP00000000670.2, ENSECAT00000000832.3
    Conserved Domains (1) summary
    cl21551
    Location:308 → 504
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials