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ZAN zonadhesin [ Equus caballus (horse) ]

Gene ID: 100147025, updated on 17-Aug-2024

Summary

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Official Symbol
ZANprovided by VGNC
Official Full Name
zonadhesinprovided by VGNC
Primary source
VGNC:VGNC:57132
See related
Ensembl:ENSECAG00000016429
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ZAN in Genome Data Viewer
Location:
chromosome: 13
Exon count:
48
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 13 NC_009156.3 (9014854..9048439)

Chromosome 13 - NC_009156.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111776196 Neighboring gene POP7 homolog, ribonuclease P/MRP subunit Neighboring gene erythropoietin Neighboring gene EPH receptor B4 Neighboring gene solute carrier family 12 member 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009156.3 Chromosome 13 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Zonadhesin D3-polypeptides vary among species but are similar in Equus species capable of interbreeding. Tardif S, et al. Biol Reprod, 2010 Feb. PMID 19794156, Free PMC Article
  2. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zonadhesin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009156.3 Reference EquCab3.0 Primary Assembly

    Range
    9014854..9048439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023655363.1 → XP_023511131.1  zonadhesin isoform X1

    UniProtKB/TrEMBL
    A0A9L0S0J2
    Related
    ENSECAP00000067569.1, ENSECAT00000080969.1
    Conserved Domains (8) summary
    smart00832
    Location:1090 → 1163
    C8; This domain contains 8 conserved cysteine residues
    pfam00008
    Location:2468 → 2497
    EGF; EGF-like domain
    pfam00094
    Location:897 → 1049
    VWD; von Willebrand factor type D domain
    pfam00629
    Location:62 → 223
    MAM; MAM domain, meprin/A5/mu
    pfam01826
    Location:1166 → 1219
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam08742
    Location:1484 → 1550
    C8; C8 domain
    pfam12714
    Location:2008 → 2053
    TILa; TILa domain
    cl25496
    Location:516 → 790
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. XM_023655364.1 → XP_023511132.1  zonadhesin isoform X2

    UniProtKB/TrEMBL
    A0A9L0S0J2
    Conserved Domains (8) summary
    smart00832
    Location:1090 → 1163
    C8; This domain contains 8 conserved cysteine residues
    pfam00008
    Location:2468 → 2497
    EGF; EGF-like domain
    pfam00094
    Location:897 → 1049
    VWD; von Willebrand factor type D domain
    pfam00629
    Location:62 → 223
    MAM; MAM domain, meprin/A5/mu
    pfam01826
    Location:1166 → 1219
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam08742
    Location:1484 → 1550
    C8; C8 domain
    pfam12714
    Location:2008 → 2053
    TILa; TILa domain
    cl25496
    Location:516 → 790
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
Nucleotide Protein
Heading Accession and Version

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