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AP3B2 adaptor related protein complex 3 subunit beta 2 [ Equus caballus (horse) ]

Gene ID: 100146798, updated on 17-Aug-2024

Summary

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Official Symbol
AP3B2provided by VGNC
Official Full Name
adaptor related protein complex 3 subunit beta 2provided by VGNC
Primary source
VGNC:VGNC:15383
See related
Ensembl:ENSECAG00000019658
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See AP3B2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (92808699..92841240)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106782163 Neighboring gene microRNA mir-1839 Neighboring gene uncharacterized LOC102148634 Neighboring gene uncharacterized LOC111770227 Neighboring gene cytoplasmic polyadenylation element binding protein 1 Neighboring gene uncharacterized LOC111770209

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in anterograde synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-3 complex subunit beta-2
Names
adaptor related protein complex 3 beta 2 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    92808699..92841240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023626484.1 → XP_023482252.1  AP-3 complex subunit beta-2 isoform X1

    UniProtKB/TrEMBL
    F7E0R1
    Related
    ENSECAP00000017670.3, ENSECAT00000021455.4
    Conserved Domains (3) summary
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:34 → 590
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:807 → 950
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  2. XM_023626538.1 → XP_023482306.1  AP-3 complex subunit beta-2 isoform X2

    UniProtKB/TrEMBL
    A0A9L0T3L4, A0A9L0TP17
    Related
    ENSECAP00000081689.1, ENSECAT00000109622.1
    Conserved Domains (3) summary
    sd00044
    Location:156 → 184
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:79 → 635
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:852 → 995
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  3. XM_023626598.1 → XP_023482366.1  AP-3 complex subunit beta-2 isoform X3

    UniProtKB/TrEMBL
    A0A9L0S1L5
    Conserved Domains (3) summary
    sd00044
    Location:37 → 63
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:1 → 445
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:662 → 805
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
Nucleotide Protein
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