U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HS6ST3 heparan sulfate 6-O-sulfotransferase 3 [ Equus caballus (horse) ]

Gene ID: 100146646, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
HS6ST3provided by VGNC
Official Full Name
heparan sulfate 6-O-sulfotransferase 3provided by VGNC
Primary source
VGNC:VGNC:84461
See related
Ensembl:ENSECAG00000003050
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See HS6ST3 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 17 NC_009160.3 (65690769..66352494)

Chromosome 17 - NC_009160.3Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C3 Neighboring gene UDP-glucose glycoprotein glucosyltransferase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin-conjugating enzyme E2 variant 3 pseudogene Neighboring gene oxoglutarate receptor 1 Neighboring gene uncharacterized LOC111768619 Neighboring gene muscleblind like splicing regulator 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_009160.3 Chromosome 17 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heparan-sulfate 6-O-sulfotransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009160.3 Reference EquCab3.0 Primary Assembly

    Range
    65690769..66352494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023621737.1 → XP_023477505.1  heparan-sulfate 6-O-sulfotransferase 3

    UniProtKB/TrEMBL
    F7DUK3
    Related
    ENSECAP00000002065.3, ENSECAT00000002884.4
    Conserved Domains (1) summary
    pfam03567
    Location:143 → 409
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials