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LALBA lactalbumin alpha [ Equus caballus (horse) ]

Gene ID: 100146585, updated on 17-Aug-2024

Summary

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Official Symbol
LALBAprovided by VGNC
Official Full Name
lactalbumin alphaprovided by VGNC
Primary source
VGNC:VGNC:19562
See related
Ensembl:ENSECAG00000001401
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
LYZG
Orthologs
human mouse all
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Genomic context

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See LALBA in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (67372475..67375877, complement)

Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 5 subfamily BS member 6, pseudogene Neighboring gene olfactory receptor family 5 subfamily BS member 1, pseudogene Neighboring gene olfactory receptor family 11 subfamily M member 4, pseudogene Neighboring gene lysozyme C, milk isozyme

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009149.3 Chromosome 6 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lactose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to Gram-negative bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to Gram-positive bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lactose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-lactalbumin
Names
lysozyme G

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009149.3 Reference EquCab3.0 Primary Assembly

    Range
    67372475..67375877 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001915789.4 → XP_001915824.1  alpha-lactalbumin

    See identical proteins and their annotated locations for XP_001915824.1

    UniProtKB/Swiss-Prot
    P08334
    UniProtKB/TrEMBL
    A0A5F5PQV8, A0A5K1V2X0
    Related
    ENSECAP00000051035.2, ENSECAT00000070750.2
    Conserved Domains (1) summary
    pfam00062
    Location:20 → 138
    Lys; C-type lysozyme/alpha-lactalbumin family
Nucleotide Protein
Heading Accession and Version

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