U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 [ Equus caballus (horse) ]

Gene ID: 100146508, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
B3GNT6provided by VGNC
Official Full Name
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6provided by VGNC
Primary source
VGNC:VGNC:55800
See related
Ensembl:ENSECAG00000019463
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See B3GNT6 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (69461676..69477820, complement)

Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene myosin VIIA Neighboring gene calpain 5 Neighboring gene olfactory marker protein Neighboring gene uncharacterized LOC111774332 Neighboring gene uncharacterized LOC111774333

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_009150.3 Chromosome 7 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase
Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009150.3 Reference EquCab3.0 Primary Assembly

    Range
    69461676..69477820 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023645669.1 → XP_023501437.1  acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    F6V789
    Related
    ENSECAP00000062835.1, ENSECAT00000084683.1
    Conserved Domains (1) summary
    cl21608
    Location:132 → 324
    Galactosyl_T; Galactosyltransferase

  2. XM_023645668.1 → XP_023501436.1  acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A9L0TFU6
    Related
    ENSECAP00000085194.1, ENSECAT00000116964.1
    Conserved Domains (1) summary
    cl21608
    Location:146 → 338
    Galactosyl_T; Galactosyltransferase

  3. XM_023645670.1 → XP_023501438.1  acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    F6V789
    Related
    ENSECAP00000079979.1, ENSECAT00000129482.1
    Conserved Domains (1) summary
    cl21608
    Location:132 → 324
    Galactosyl_T; Galactosyltransferase

RNA

  1. XR_002809286.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.