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LYPLA1 lysophospholipase 1 [ Equus caballus (horse) ]

Gene ID: 100146256, updated on 17-Aug-2024

Summary

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Official Symbol
LYPLA1provided by VGNC
Official Full Name
lysophospholipase 1provided by VGNC
Primary source
VGNC:VGNC:56737
See related
Ensembl:ENSECAG00000016530
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See LYPLA1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 9 NC_009152.3 (30220506..30257392)

Chromosome 9 - NC_009152.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111774958 Neighboring gene mitochondrial ribosomal protein L15 Neighboring gene uncharacterized LOC111774957 Neighboring gene transcription elongation factor A1 Neighboring gene regulator of G protein signaling 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009152.3 Chromosome 9 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carboxylic ester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-protein thioesterase 1
Names
lysophospholipase I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009152.3 Reference EquCab3.0 Primary Assembly

    Range
    30220506..30257392
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005613164.3 → XP_005613221.3  acyl-protein thioesterase 1 isoform X2

    UniProtKB/TrEMBL
    K9K450
    Conserved Domains (1) summary
    pfam02230
    Location:1 → 168
    Abhydrolase_2; Phospholipase/Carboxylesterase

  2. XM_023648611.1 → XP_023504379.1  acyl-protein thioesterase 1 isoform X3

    UniProtKB/TrEMBL
    A0A5F5PM21
    Related
    ENSECAP00000048934.2, ENSECAT00000075167.2
    Conserved Domains (1) summary
    pfam02230
    Location:8 → 192
    Abhydrolase_2; Phospholipase/Carboxylesterase

  3. XM_023648610.1 → XP_023504378.1  acyl-protein thioesterase 1 isoform X1

    UniProtKB/TrEMBL
    F6WUK8
    Related
    ENSECAP00000014282.3, ENSECAT00000017567.3
    Conserved Domains (1) summary
    pfam02230
    Location:8 → 226
    Abhydrolase_2; Phospholipase/Carboxylesterase

  4. XM_023648613.1 → XP_023504381.1  acyl-protein thioesterase 1 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2I484, F6WUK8
    Related
    ENSECAP00000042613.2, ENSECAT00000059043.2
    Conserved Domains (1) summary
    pfam02230
    Location:56 → 258
    Abhydrolase_2; Phospholipase/Carboxylesterase

  5. XM_023648612.1 → XP_023504380.1  acyl-protein thioesterase 1 isoform X2

    UniProtKB/TrEMBL
    K9K450
    Conserved Domains (1) summary
    pfam02230
    Location:1 → 168
    Abhydrolase_2; Phospholipase/Carboxylesterase
Nucleotide Protein
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