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NAGA alpha-N-acetylgalactosaminidase [ Ovis aries (sheep) ]

Gene ID: 100145858, updated on 8-Mar-2024

Summary

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Gene symbol
NAGA
Gene description
alpha-N-acetylgalactosaminidase
See related
EnsemblRapid:ENSOARG00020000276
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See NAGA in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (218879133..218887390, complement)

Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132659642 Neighboring gene septin 3 Neighboring gene WBP2 N-terminal like Neighboring gene PH domain containing endocytic trafficking adaptor 2 Neighboring gene single-pass membrane protein with aspartate rich tail 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminidase
Names
N-acetylgalactosaminidase, alpha-
NP_001119817.1
XP_012013988.1
XP_042101072.1
XP_042101073.1
XP_042101074.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126345.1 → NP_001119817.1  alpha-N-acetylgalactosaminidase precursor

    See identical proteins and their annotated locations for NP_001119817.1

    Status: PROVISIONAL

    Source sequence(s)
    EU579460
    UniProtKB/TrEMBL
    A0A6P3CWU6, B2LSM7, W5QBZ7
    Conserved Domains (2) summary
    pfam17450
    Location:311 → 394
    Melibiase_2_C; Alpha galactosidase A C-terminal beta sandwich domain
    cl38930
    Location:26 → 308
    AmyAc_family; Alpha amylase catalytic domain family

RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    218879133..218887390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042245139.2 → XP_042101073.1  alpha-N-acetylgalactosaminidase isoform X2

    UniProtKB/TrEMBL
    A0A6P3CWU6, B2LSM7, W5QBZ7
    Conserved Domains (2) summary
    pfam17450
    Location:311 → 394
    Melibiase_2_C; Alpha galactosidase A C-terminal beta sandwich domain
    cl38930
    Location:26 → 308
    AmyAc_family; Alpha amylase catalytic domain family

  2. XM_042245138.2 → XP_042101072.1  alpha-N-acetylgalactosaminidase isoform X1

    UniProtKB/TrEMBL
    W5QBZ7
    Conserved Domains (1) summary
    cl38930
    Location:31 → 313
    AmyAc_family; Alpha amylase catalytic domain family

  3. XM_012158598.4 → XP_012013988.1  alpha-N-acetylgalactosaminidase isoform X2

    See identical proteins and their annotated locations for XP_012013988.1

    UniProtKB/TrEMBL
    A0A6P3CWU6, B2LSM7, W5QBZ7
    Conserved Domains (2) summary
    pfam17450
    Location:311 → 394
    Melibiase_2_C; Alpha galactosidase A C-terminal beta sandwich domain
    cl38930
    Location:26 → 308
    AmyAc_family; Alpha amylase catalytic domain family

  4. XM_042245140.2 → XP_042101074.1  alpha-N-acetylgalactosaminidase isoform X1

    UniProtKB/TrEMBL
    W5QBZ7
    Related
    ENSOARP00020000251.2, ENSOART00020000336.2
    Conserved Domains (1) summary
    cl38930
    Location:31 → 313
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein Strain
Heading Accession and Version

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