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hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100145790, updated on 14-Nov-2024

Summary

Official Symbol
hs3st5provided by Xenbase
Official Full Name
heparan sulfate-glucosamine 3-sulfotransferase 5provided by Xenbase
Primary source
Xenbase:XB-GENE-5795358
See related
Ensembl:ENSXETG00000020230 AllianceGenome:Xenbase:XB-GENE-5795358
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to enable sulfotransferase activity. Orthologous to human HS3ST5 (heparan sulfate-glucosamine 3-sulfotransferase 5). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See hs3st5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (75684274..75819104)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (72632304..72770159)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene general transcription factor II-I repeat domain-containing protein 2A-like Neighboring gene uncharacterized LOC116410839 Neighboring gene histone deacetylase 2 Neighboring gene myristoylated alanine-rich protein kinase C substrate

Genomic regions, transcripts, and products

General protein information

Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5
Names
heparan sulfate (glucosamine) 3-O-sulfotransferase 5
NP_001120624.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127152.1NP_001120624.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    See identical proteins and their annotated locations for NP_001120624.1

    Status: PROVISIONAL

    Source sequence(s)
    BC161771
    UniProtKB/TrEMBL
    B1WBI7, F6V088
    Related
    ENSXETP00000043647.3, ENSXETT00000043647.5
    Conserved Domains (1) summary
    pfam00685
    Location:89329
    Sulfotransfer_1; Sulfotransferase domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    75684274..75819104
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)