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has1l hyaluronan synthase 1 like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100145746, updated on 4-Nov-2024

Summary

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Official Symbol
has1lprovided by Xenbase
Official Full Name
hyaluronan synthase 1 likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-22062960
See related
Ensembl:ENSXETG00000020515 AllianceGenome:Xenbase:XB-GENE-22062960
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
has1
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See has1l in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (3052439..3056284, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016684669.1 (57..7638, complement)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 38 like Neighboring gene basic helix-loop-helix ARNT like 2 Neighboring gene hyaluronan synthase-related protein-like Neighboring gene mediator complex subunit 21 Neighboring gene nucleoporin 50kDa

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
hyaluronan synthase 1
NP_001120590.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127118.1 → NP_001120590.1  hyaluronan synthase 1

    See identical proteins and their annotated locations for NP_001120590.1

    Status: PROVISIONAL

    Source sequence(s)
    BC161605
    UniProtKB/Swiss-Prot
    B1WB39
    UniProtKB/TrEMBL
    A0A803JPG2
    Related
    ENSXETP00000109864.1, ENSXETT00000120130.1
    Conserved Domains (1) summary
    cl11394
    Location:101 → 389
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    3052439..3056284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B1WB39.1 GenPept UniProtKB/Swiss-Prot:B1WB39

Gene LinkOut

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