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ZNF10 zinc finger protein 10 [ Bos taurus (domestic cattle) ]

Gene ID: 100140756, updated on 4-Oct-2024

Summary

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Official Symbol
ZNF10provided by VGNC
Official Full Name
zinc finger protein 10provided by VGNC
Primary source
VGNC:VGNC:52850
See related
Ensembl:ENSBTAG00000039242
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human all
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Genomic context

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See ZNF10 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (44157095..44171173)

Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 84 Neighboring gene zinc finger protein 140 Neighboring gene zinc finger protein 891 Neighboring gene uncharacterized LOC132342602 Neighboring gene zinc finger protein 268 Neighboring gene methyl-CpG binding domain protein 3 like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    44157095..44171173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010813861.4 → XP_010812163.2  zinc finger protein 10 isoform X2

    Related
    ENSBTAP00000053058.4, ENSBTAT00000056931.4
    Conserved Domains (3) summary
    smart00349
    Location:14 → 73
    KRAB; krueppel associated box
    COG5048
    Location:270 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:433 → 453
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_010813862.4 → XP_010812164.2  zinc finger protein 10 isoform X3

    Conserved Domains (3) summary
    smart00349
    Location:1 → 36
    KRAB; krueppel associated box
    COG5048
    Location:233 → 435
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:396 → 416
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_015475448.3 → XP_015330934.2  zinc finger protein 10 isoform X1

    Conserved Domains (3) summary
    smart00349
    Location:52 → 111
    KRAB; krueppel associated box
    COG5048
    Location:308 → 510
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:471 → 491
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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