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cav1 caveolin 1 [ Takifugu rubripes (torafugu) ]

Gene ID: 100137154, updated on 8-Mar-2024

Summary

Gene symbol
cav1
Gene description
caveolin 1
See related
Ensembl:ENSTRUG00000025224
Gene type
protein coding
RefSeq status
INFERRED
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
cav-1; Caveolin-1
Orthologs
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Genomic context

See cav1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 9 NC_042293.1 (13584093..13588680)
101 previous assembly FUGU5 (GCF_000180615.1) 9 NC_018898.1 (12373915..12378515)

Chromosome 9 - NC_042293.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105416952 Neighboring gene caveolin 2 Neighboring gene uncharacterized LOC105416953 Neighboring gene MET proto-oncogene, receptor tyrosine kinase

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in caveola assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in negative regulation of endothelial cell proliferation IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in negative regulation of protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in caveola IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001170356.1NP_001163827.1  caveolin-1

    See identical proteins and their annotated locations for NP_001163827.1

    Status: INFERRED

    Source sequence(s)
    AC090119
    UniProtKB/Swiss-Prot
    Q8UW43, Q9YGM8
    UniProtKB/TrEMBL
    A0A3B5KAY2
    Related
    ENSTRUP00000053155.1, ENSTRUT00000049777.2
    Conserved Domains (1) summary
    pfam01146
    Location:48178
    Caveolin

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042293.1 Reference fTakRub1.2 Primary Assembly

    Range
    13584093..13588680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)