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LOC100136992 starch synthase 3, chloroplastic/amyloplastic [ Triticum aestivum (bread wheat) ]

Gene ID: 100136992, updated on 30-Nov-2023

Summary

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Gene symbol
LOC100136992
Gene description
starch synthase 3, chloroplastic/amyloplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Triticum aestivum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Genomic context

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See LOC100136992 in Genome Data Viewer
Location:
chromosome: 2B
Exon count:
16
Annotation release Status Assembly Chr Location
100 current IWGSC CS RefSeq v2.1 (GCF_018294505.1) 2B NC_057798.1 (698067030..698075303, complement)

Chromosome 2B - NC_057798.1Genomic Context describing neighboring genes Neighboring gene phospholipid scramblase family protein C343.06c-like Neighboring gene uncharacterized LOC123046783 Neighboring gene translation initiation factor IF-2-like Neighboring gene uncharacterized LOC123042125

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057798.1 Chromosome 2B Reference IWGSC CS RefSeq v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative Temporal Transcriptome Profiling of Wheat near Isogenic Line Carrying Lr57 under Compatible and Incompatible Interactions. Yadav IS, et al. Front Plant Sci, 2016. PMID 28066494, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen (starch) synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch synthase 3, chloroplastic/amyloplastic
Names
starch synthase IIIb

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Triticum aestivum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IWGSC CS RefSeq v2.1 Primary Assembly

Genomic

  1. NC_057798.1 Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Range
    698067030..698075303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044470215.1 → XP_044326150.1  starch synthase 3, chloroplastic/amyloplastic

    UniProtKB/TrEMBL
    A0A3B6CDA1
    Conserved Domains (2) summary
    PLN02316
    Location:66 → 1275
    PLN02316; synthase/transferase
    TIGR00927
    Location:106 → 366
    2A1904; K+-dependent Na+/Ca+ exchanger
Nucleotide Protein
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