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AIMP1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [ Sus scrofa (pig) ]

Gene ID: 100135670, updated on 17-Aug-2024

Summary

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Official Symbol
AIMP1provided by VGNC
Official Full Name
aminoacyl tRNA synthetase complex interacting multifunctional protein 1provided by VGNC
Primary source
VGNC:VGNC:85202
See related
Ensembl:ENSSSCG00000024168
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
SCYE1
Expression
Ubiquitous expression in psoas major muscle (RPKM 68.1), longissimus dorsi muscle (RPKM 66.4) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See AIMP1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 8 NC_010450.4 (115437453..115476735, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 8 NC_010450.3 (123840344..123893742, complement)

Chromosome 8 - NC_010450.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110262178 Neighboring gene GIMAP family P-loop NTPase domain containing 1 Neighboring gene TBC1 domain containing kinase Neighboring gene nephronectin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aminoacyl tRNA synthase complex-interacting multifunctional protein 1
Names
small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001114283.1 → NP_001107755.1  aminoacyl tRNA synthase complex-interacting multifunctional protein 1

    See identical proteins and their annotated locations for NP_001107755.1

    Status: PROVISIONAL

    Source sequence(s)
    EU352799
    UniProtKB/TrEMBL
    A0A5K1VI30, A0A8D0LWL6, B0FWK6, I3LFC4
    Related
    ENSSSCP00000044428.2, ENSSSCT00000065886.2
    Conserved Domains (2) summary
    cd02799
    Location:158 → 260
    tRNA_bind_EMAP-II_like; tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA binding proteins, including Caenorhabditis elegans methionyl-tRNA synthetase (CeMetRS), human tyrosyl- tRNA synthetase (hTyrRS), Saccharomyces cerevisiae ...
    pfam07989
    Location:31 → 79
    Cnn_1N; Centrosomin N-terminal motif 1

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010450.4 Reference Sscrofa11.1 Primary Assembly

    Range
    115437453..115476735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021100267.1 → XP_020955926.1  aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A4X1UV89, A0A8D0KA55, A0A8D1NJ17, A0A8D1VGN8
    Conserved Domains (2) summary
    cl26127
    Location:139 → 311
    PRK12267; methionyl-tRNA synthetase; Reviewed
    cl26819
    Location:15 → 78
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain

  2. XM_021100268.1 → XP_020955927.1  aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A4X1UV89, A0A8D0KA55, A0A8D1NJ17, A0A8D1VGN8
    Related
    ENSSSCP00000022764.3, ENSSSCT00000023345.3
    Conserved Domains (2) summary
    cl26127
    Location:139 → 311
    PRK12267; methionyl-tRNA synthetase; Reviewed
    cl26819
    Location:15 → 78
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain

  3. XM_021100269.1 → XP_020955928.1  aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A4X1UV89, A0A8D0KA55, A0A8D1NJ17, A0A8D1VGN8
    Conserved Domains (2) summary
    cl26127
    Location:139 → 311
    PRK12267; methionyl-tRNA synthetase; Reviewed
    cl26819
    Location:15 → 78
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
Nucleotide Protein
Heading Accession and Version

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