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baiap2l2 BAI1 associated protein 2 like 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100135005, updated on 4-Nov-2024

Summary

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Official Symbol
baiap2l2provided by Xenbase
Official Full Name
BAI1 associated protein 2 like 2provided by Xenbase
Primary source
Xenbase:XB-GENE-920059
See related
Ensembl:ENSXETG00000006351 AllianceGenome:Xenbase:XB-GENE-920059
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to enable methenyltetrahydrofolate cyclohydrolase activity and methylenetetrahydrofolate dehydrogenase (NADP+) activity. Predicted to be involved in tetrahydrofolate interconversion. Predicted to act upstream of or within plasma membrane organization. Predicted to be active in cytosol. Orthologous to human BAIAP2L2 (BAR/IMD domain containing adaptor protein 2 like 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See baiap2l2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (122215677..122237746, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (111820224..111842361, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene SRY-box 10 Neighboring gene uncharacterized LOC105946980 Neighboring gene phospholipase A2 group VI Neighboring gene v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables methenyltetrahydrofolate cyclohydrolase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables methylenetetrahydrofolate dehydrogenase (NADP+) activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within plasma membrane organization IEA
Inferred from Electronic Annotation
more info
  
involved_in tetrahydrofolate interconversion IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    122215677..122237746 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004913882.4 → XP_004913939.2  brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2

    UniProtKB/TrEMBL
    A9ULJ5, F7B116
    Related
    ENSXETP00000013905.5, ENSXETT00000013905.5
    Conserved Domains (4) summary
    cd07644
    Location:6 → 220
    I-BAR_IMD_BAIAP2L2; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Brain-specific Angiogenesis Inhibitor 1-Associated Protein 2-Like 2
    cd11914
    Location:312 → 370
    SH3_BAIAP2L2; Src Homology 3 domain of Brain-specific Angiogenesis Inhibitor 1-Associated Protein 2-Like 2
    cd21762
    Location:461 → 464
    WH2; actin-binding sequence [structural motif]
    cl41728
    Location:459 → 474
    WH2; Wiskott-Aldrich Syndrome Homology (WASP) region 2 (WH2 motif), and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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Research Materials