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FAM66D family with sequence similarity 66 member D [ Homo sapiens (human) ]

Gene ID: 100132923, updated on 10-Oct-2023

Summary

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Official Symbol
FAM66Dprovided by HGNC
Official Full Name
family with sequence similarity 66 member Dprovided by HGNC
Primary source
HGNC:HGNC:24159
See related
AllianceGenome:HGNC:24159
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in brain (RPKM 2.5), prostate (RPKM 1.1) and 20 other tissues See more
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Genomic context

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Location:
8p23.1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (12115782..12151189)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (7583309..7618744, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (11973291..12008698)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:11946257-11946756 Neighboring gene RNA, 5S ribosomal pseudogene 253 Neighboring gene zinc finger protein 705D Neighboring gene defensin beta 108D (pseudogene) Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:11980151-11980651 Neighboring gene ubiquitin specific peptidase 17 like family member 2 pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:11994353-11994854 Neighboring gene ubiquitin specific peptidase 17 like family member 7 Neighboring gene ubiquitin specific peptidase 17 like family member 2 Neighboring gene defensin beta 109D (pseudogene) Neighboring gene family with sequence similarity 90 member A2, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:12037424-12037936 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:12037937-12038447 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:12038587-12039088 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:12039089-12039588 Neighboring gene ALG1 like 11, pseudogene Neighboring gene family with sequence similarity 86 member B1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Clone Names

  • FLJ56781

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027425.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC130366

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    12115782..12151189
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187570.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    38931..39634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001756297.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    7583309..7618744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases