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NAMPTP2 nicotinamide phosphoribosyltransferase pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100132712, updated on 17-Sep-2024

Summary

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Official Symbol
NAMPTP2provided by HGNC
Official Full Name
nicotinamide phosphoribosyltransferase pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:51314
See related
Ensembl:ENSG00000249229 AllianceGenome:HGNC:51314
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See NAMPTP2 in Genome Data Viewer
Location:
5q31.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (145002238..145005801, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (145536792..145540357, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (144381801..144385364, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L9-like Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:143949549-143950050 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:143950051-143950550 Neighboring gene RN7SK pseudogene 246 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:143978403-143978903 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr5:144157357-144158556 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:144555436-144555639 Neighboring gene NANOG hESC enhancer GRCh37_chr5:144613102-144613603 Neighboring gene argininosuccinate synthetase 1 pseudogene 10 Neighboring gene PRELI domain containing 2 Neighboring gene uncharacterized LOC105378211 Neighboring gene NANOG hESC enhancer GRCh37_chr5:144851246-144851794 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr5:144858933-144859433

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021864.1 

    Range
    101..3664
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    145002238..145005801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    145536792..145540357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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