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LOC100131532 uncharacterized LOC100131532 [ Homo sapiens (human) ]

Gene ID: 100131532, updated on 10-Oct-2023

Summary

Gene symbol
LOC100131532
Gene description
uncharacterized LOC100131532
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC100131532 in Genome Data Viewer
Location:
6q27
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (169962623..169967678)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (171318581..171323666)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene zinc finger protein 227-like Neighboring gene uncharacterized LOC107986674 Neighboring gene uncharacterized LOC107986675 Neighboring gene uncharacterized LOC105378150 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:170344536-170345041 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:170352442-170353175 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170368382-170368882 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170388707-170389258 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170389259-170389810 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170391695-170392194 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25466 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170406887-170407388 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:170432455-170433090 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:170440627-170441826 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170443766-170444266 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170444267-170444767 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170462430-170463234 Neighboring gene proline-rich receptor-like protein kinase PERK10 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17801

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027434.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC174153, AC245749

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    169962623..169967678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    171318581..171323666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)