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AKTIPP2 AKTIP pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100130746, updated on 28-Oct-2024

Summary

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Official Symbol
AKTIPP2provided by HGNC
Official Full Name
AKTIP pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:56420
See related
AllianceGenome:HGNC:56420
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See AKTIPP2 in Genome Data Viewer
Location:
5p14.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (24170171..24171445)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (24277618..24278892)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (24170280..24171554)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2899 Neighboring gene ADH5 pseudogene 5 Neighboring gene uncharacterized LOC124901173 Neighboring gene AKT interacting protein pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:24208573-24209476 Neighboring gene uncharacterized LOC105374689 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:24382088-24382767 Neighboring gene Sharpr-MPRA regulatory region 3372 Neighboring gene cadherin 10 Neighboring gene Neanderthal introgressed variant-containing enhancers experimental_84111 and experimental_84123 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:24644784-24645379 Neighboring gene uncharacterized LOC124901174

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030076.2 

    Range
    1..1275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    24170171..24171445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    24277618..24278892
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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