U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

EPB41L1-AS1 EPB41L1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100130373, updated on 10-Oct-2023

Summary

Official Symbol
EPB41L1-AS1provided by HGNC
Official Full Name
EPB41L1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55728
See related
AllianceGenome:HGNC:55728
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See EPB41L1-AS1 in Genome Data Viewer
Location:
20q11.23
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (36147281..36155760, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (37868274..37876752, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (34735203..34743682, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene high mobility group box 3 pseudogene 2 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:34679298-34680250 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12867 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:34681205-34682156 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:34683285-34683786 Neighboring gene NANOG hESC enhancer GRCh37_chr20:34685650-34686158 Neighboring gene erythrocyte membrane protein band 4.1 like 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:34700699-34701198 Neighboring gene uncharacterized LOC124904977 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:34716909-34717410 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17804 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12869 Neighboring gene uncharacterized LOC124904893 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12870 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:34761581-34762283 Neighboring gene uncharacterized LOC124904892 Neighboring gene Sharpr-MPRA regulatory region 2694 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17805 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr20:34799860-34801059 Neighboring gene uncharacterized LOC105372602

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_147703.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL121895

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    36147281..36155760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    37868274..37876752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)