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LOC100129573 tRNA methyltransferase 2 homolog B (S. cerevisiae) pseudogene [ Homo sapiens (human) ]

Gene ID: 100129573, updated on 17-Sep-2024

Summary

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Gene symbol
LOC100129573
Gene description
tRNA methyltransferase 2 homolog B (S. cerevisiae) pseudogene
See related
Ensembl:ENSG00000232036
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100129573 in Genome Data Viewer
Location:
1q25.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (184566487..184567858)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (183929713..183931084)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (184535621..184536992)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RNA, 7SL, cytoplasmic 654, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:184332598-184333098 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:184333099-184333599 Neighboring gene NANOG hESC enhancer GRCh37_chr1:184350504-184351220 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1637 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1638 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1639 Neighboring gene C1orf21 divergent transcript Neighboring gene chromosome 1 open reading frame 21 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2234 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:184489382-184489943 Neighboring gene uncharacterized LOC107985236 Neighboring gene uncharacterized LOC124904468

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae) pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009453.3 

    Range
    101..1472
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    184566487..184567858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    183929713..183931084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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