WASIR1 WASH and IL9R antisense RNA 1 [Homo sapiens (human)] - Gene

Summary

Official Symbol: WASIR1provided by HGNC
Official Full Name: WASH and IL9R antisense RNA 1provided by HGNC
Primary source: HGNC:HGNC:38513
See related: Ensembl:ENSG00000185203 Ensembl:ENSG00000292370 AllianceGenome:HGNC:38513
Gene type: ncRNA
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: NCRNA00286B
Expression: Biased expression in ovary (RPKM 1.3), thyroid (RPKM 0.3) and 10 other tissues See more
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Genomic context

Location:: Xq28 and Yq12

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2023_10	current	GRCh38.p14 (GCF_000001405.40)	X	NC_000023.11 (156014564..156016830, complement)
RS_2023_10	current	GRCh38.p14 (GCF_000001405.40)	Y	NC_000024.10 (57201084..57203350, complement)
RS_2023_10	current	T2T-CHM13v2.0 (GCF_009914755.1)	X	NC_060947.1 (154242570..154244833, complement)
RS_2023_10	current	T2T-CHM13v2.0 (GCF_009914755.1)	Y	NC_060948.1 (62439553..62441822, complement)
105.20220307	previous assembly	GRCh37.p13 (GCF_000001405.25)	X	NC_000023.10 (155244229..155246495, complement)
105.20220307	previous assembly	GRCh37.p13 (GCF_000001405.25)	Y	NC_000024.9 (59347235..59349501, complement)

Chromosome X - NC_000023.11 Genomic Context describing neighboring genes

Chromosome Y - NC_000024.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Markers

ECD08574 (e-PCR)
- UniSTS:289622

ECD16799 (e-PCR)
- UniSTS:297814

stSG608809 (e-PCR)
- UniSTS:448351

stSG608810 (e-PCR)
- UniSTS:448352

stSG608811 (e-PCR)
- UniSTS:448353

REN94418 (e-PCR)
- UniSTS:419216

ECD20488 (e-PCR)
- UniSTS:301491

Other Names

WASH and IL9R antisense RNA 1 (non-protein coding)
non-protein coding RNA 286B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.