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pter phosphotriesterase related [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100127841, updated on 17-Aug-2024

Summary

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Official Symbol
pterprovided by Xenbase
Official Full Name
phosphotriesterase relatedprovided by Xenbase
Primary source
Xenbase:XB-GENE-1007035
See related
Ensembl:ENSXETG00000007448
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See pter in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (28897978..28920903, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (20644440..20663657, complement)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene Ras suppressor protein 1 Neighboring gene complement component 1, q subcomponent-like 3 Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within catabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phosphotriesterase-related protein
Names
parathion hydrolase-related protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113147.1 → NP_001106618.1  phosphotriesterase-related protein

    See identical proteins and their annotated locations for NP_001106618.1

    Status: PROVISIONAL

    Source sequence(s)
    BC155461
    UniProtKB/Swiss-Prot
    A9JTS9
    Related
    ENSXETP00000110145.1, ENSXETT00000123904.1
    Conserved Domains (1) summary
    cd00530
    Location:21 → 346
    PTE; Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site ...

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    28897978..28920903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012964237.1 → XP_012819691.1  phosphotriesterase-related protein isoform X1

    See identical proteins and their annotated locations for XP_012819691.1

    UniProtKB/TrEMBL
    F6XQC2
    Related
    ENSXETP00000105544.1, ENSXETT00000106706.1
    Conserved Domains (1) summary
    cd00530
    Location:21 → 346
    PTE; Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site ...

RNA

  1. XR_004223080.1 RNA Sequence

  2. XR_004223079.1 RNA Sequence

  3. XR_001170946.3 RNA Sequence

  4. XR_004223081.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A9JTS9.1 GenPept UniProtKB/Swiss-Prot:A9JTS9

Gene LinkOut

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