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cbln2 cerebellin 2 precursor [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100127549, updated on 17-Aug-2024

Summary

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Official Symbol
cbln2provided by Xenbase
Official Full Name
cerebellin 2 precursorprovided by Xenbase
Primary source
Xenbase:XB-GENE-5897871
See related
Ensembl:ENSXETG00000016861
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See cbln2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (100627276..100632472)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683375.1 (2082508..2087092)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116411599 Neighboring gene neuropilin and tolloid like 1 Neighboring gene uncharacterized LOC100495124 Neighboring gene translation initiation factor IF-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
cerebellin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001112926.1 → NP_001106397.1  cerebellin-2

    See identical proteins and their annotated locations for NP_001106397.1

    Status: PROVISIONAL

    Source sequence(s)
    BC152045
    UniProtKB/TrEMBL
    A0A6I8SWM6, A7MC51, F6U6P4
    Related
    ENSXETP00000036744.3, ENSXETT00000036744.5
    Conserved Domains (1) summary
    cl23878
    Location:84 → 222
    C1q; C1q domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    100627276..100632472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031903185.1 → XP_031759045.1  cerebellin-2 isoform X1

    UniProtKB/TrEMBL
    A0A6I8SWM6, A7MC51, F6U6P4
    Conserved Domains (1) summary
    cl23878
    Location:84 → 222
    C1q; C1q domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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