U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

XB5811292.S uncharacterized XB5811292 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100127257, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Symbol
XB5811292.S
Full Name
uncharacterized XB5811292 S homeolog
Primary source
Xenbase:XB-GENE-5811315
Locus tag
XELAEV_18047290mg
See related
EnsemblRapid:ENSXLAG00005030316
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
XB5811292.L; LOC100498450.S
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 9_10S
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (73837759..73851725, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (67186089..67200019, complement)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene receptor (G protein-coupled) activity modifying protein 1 S homeolog Neighboring gene ubiquitin conjugating enzyme E2F (putative) S homeolog Neighboring gene uncharacterized methyltransferase-like C25B8.10 Neighboring gene uncharacterized LOC100217319

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within methylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC100127257

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001112835.1 → NP_001106306.1  uncharacterized protein LOC100127257

    See identical proteins and their annotated locations for NP_001106306.1

    Status: PREDICTED

    Source sequence(s)
    BC154974
    UniProtKB/TrEMBL
    A0A974BV24, A8WH51
    Related
    ENSXLAP00005090591.1, ENSXLAT00005092269.1
    Conserved Domains (1) summary
    pfam08241
    Location:28 → 120
    Methyltransf_11; Methyltransferase domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    73837759..73851725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials