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Esp38 exocrine gland secreted peptide 38 [ Mus musculus (house mouse) ]

Gene ID: 100126775, updated on 2-Nov-2024

Summary

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Official Symbol
Esp38provided by MGI
Official Full Name
exocrine gland secreted peptide 38provided by MGI
Primary source
MGI:MGI:5439397
See related
Ensembl:ENSMUSG00000095886 AllianceGenome:MGI:5439397
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm21946
Summary
Enables pheromone activity. Located in extracellular space. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Esp38 in Genome Data Viewer
Location:
17 B2; 17
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (40261411..40266178)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (39950520..39955287)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene exocrine gland secreted peptide 15 Neighboring gene STARR-seq mESC enhancer starr_42537 Neighboring gene 18s RNA, related sequence 5 Neighboring gene cDNA sequence AY036118 Neighboring gene predicted gene, 26917 Neighboring gene STARR-seq mESC enhancer starr_42538 Neighboring gene TGFB-induced factor homeobox 2, pseudogene 2 Neighboring gene STARR-seq mESC enhancer starr_42539 Neighboring gene phosphoglycerate kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The roles of gene duplication, gene conversion and positive selection in rodent Esp and Mup pheromone gene families with comparison to the Abp family. Karn RC, et al. PLoS One, 2012. PMID 23094077, Free PMC Article
  2. Sex- and strain-specific expression and vomeronasal activity of mouse ESP family peptides. Kimoto H, et al. Curr Biol, 2007 Nov 6. PMID 17935991

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables pheromone activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables pheromone activity ISA
Inferred from Sequence Alignment
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular space IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
exocrine gland-secreting peptide 38

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001256051.1 → NP_001242980.1  exocrine gland-secreting peptide 38 precursor

    See identical proteins and their annotated locations for NP_001242980.1

    Status: VALIDATED

    Source sequence(s)
    AC188608
    Consensus CDS
    CCDS57091.1
    UniProtKB/TrEMBL
    A0A3B2W3Y6, A8R0X1
    Related
    ENSMUSP00000136698.2, ENSMUST00000178880.2
    Conserved Domains (1) summary
    pfam16590
    Location:24 → 80
    ESP; Exocrine gland-secreting peptide

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    40261411..40266178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
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