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fam177a1 family with sequence similarity 177 member A1 [ Danio rerio (zebrafish) ]

Gene ID: 100126028, updated on 2-Nov-2024

Summary

Official Symbol
fam177a1provided by ZNC
Official Full Name
family with sequence similarity 177 member A1provided by ZNC
Primary source
ZFIN:ZDB-GENE-070928-21
See related
Ensembl:ENSDARG00000079636 AllianceGenome:ZFIN:ZDB-GENE-070928-21
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
im:7162964; zgc:171690
Summary
Orthologous to human FAM177A1 (family with sequence similarity 177 member A1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See fam177a1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (13019495..13026634, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (12865429..12872568, complement)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene proteasome 20S subunit alpha 6a Neighboring gene protein only RNase P catalytic subunit Neighboring gene protein phosphatase 2, regulatory subunit B'', gamma Neighboring gene F-box protein 33 Neighboring gene MIA SH3 domain ER export factor 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001105707.1NP_001099177.1  protein FAM177A1

    See identical proteins and their annotated locations for NP_001099177.1

    Status: PROVISIONAL

    Source sequence(s)
    BC151928
    UniProtKB/TrEMBL
    A7MBV3
    Related
    ENSDARP00000100037.1, ENSDART00000113713.3
    Conserved Domains (1) summary
    pfam14774
    Location:33138
    FAM177; FAM177 family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    13019495..13026634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)