Trac T cell receptor alpha constant [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Tracprovided by MGI
Official Full Name: T cell receptor alpha constantprovided by MGI
Primary source: MGI:MGI:4439838
See related: IMGT/GENE-DB:TRAC; AllianceGenome:MGI:4439838
Gene type: other
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Tcra; Tcra-C; Gm16914
Summary: Predicted to be involved in response to bacterium. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system gland; and liver and biliary system. [provided by Alliance of Genome Resources, Apr 2022]
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: 14 27.7 cM; 14 C2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	14	NC_000080.7 (54457978..54461655)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	14	NC_000080.6 (54220521..54224198)

Chromosome 14 - NC_000080.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Variation

Go to the top of the page Help

Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (4) 1 citation
Not Applicable (1) 1 citation

General gene information

Go to the top of the page Help

Markers

PMC200946P1 (e-PCR)
- UniSTS:271872

D14Mit142 (e-PCR), detects polymorphism
- UniSTS:127249

RH67867 (e-PCR)
- UniSTS:45842

D14Mit259 (e-PCR), detects polymorphism
- UniSTS:127370

BE626218 (e-PCR)
- UniSTS:209036

RH46901 (e-PCR)
- UniSTS:57275

Tcra-C (e-PCR), detects polymorphism
- UniSTS:144577

Tcrd (e-PCR), detects polymorphism
- UniSTS:144581

PMC15475P1 (e-PCR)
- UniSTS:271316

Atp5j (e-PCR), detects polymorphism
- UniSTS:259039

M14506 (e-PCR)
- UniSTS:124917

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables signaling receptor activity	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in response to bacterium	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of alpha-beta T cell receptor complex	ISO Inferred from Sequence Orthology more info
located_in plasma membrane	ISO Inferred from Sequence Orthology more info

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.