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SEMA4C semaphorin 4C [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100091021, updated on 30-Apr-2024

Summary

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Gene symbol
SEMA4C
Gene description
semaphorin 4C
See related
Ensembl:ENSOANG00000000249
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See SEMA4C in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 11 NC_041738.1 (1549216..1557503)

Chromosome 11 - NC_041738.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 5B, mitochondrial Neighboring gene family with sequence similarity 178 member B Neighboring gene ankyrin repeat domain 39 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041738.1 Chromosome 11 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-4C
Names
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041738.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    1549216..1557503
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029076066.2 → XP_028931899.2  semaphorin-4C

    UniProtKB/TrEMBL
    F6YUN4
    Conserved Domains (3) summary
    cd11258
    Location:44 → 499
    Sema_4C; The Sema domain, a protein interacting module, of semaphorin 4C (Sema4C)
    smart00409
    Location:562 → 627
    IG; Immunoglobulin
    smart00423
    Location:500 → 544
    PSI; domain found in Plexins, Semaphorins and Integrins
Nucleotide Protein
Heading Accession and Version

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