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LIPC lipase C, hepatic type [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100085596, updated on 18-Sep-2024

Summary

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Gene symbol
LIPC
Gene description
lipase C, hepatic type
See related
Ensembl:ENSOANG00000048492
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See LIPC in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 8 NC_041735.1 (2992507..3022411, complement)

Chromosome 8 - NC_041735.1Genomic Context describing neighboring genes Neighboring gene MINDY lysine 48 deubiquitinase 2 Neighboring gene small nucleolar RNA SNORA7 Neighboring gene ADAM metallopeptidase domain 10 Neighboring gene aquaporin 9 Neighboring gene aldehyde dehydrogenase 1 family member A2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041735.1 Chromosome 8 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables apolipoprotein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hepatic triacylglycerol lipase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041735.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    2992507..3022411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029070102.2 → XP_028925935.1  hepatic triacylglycerol lipase isoform X2

    UniProtKB/TrEMBL
    A0A6I8NAR2
    Conserved Domains (2) summary
    pfam00151
    Location:33 → 301
    Lipase
    cl00011
    Location:304 → 439
    PLAT; PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and ...

  2. XM_029070101.2 → XP_028925934.1  hepatic triacylglycerol lipase isoform X1

    UniProtKB/TrEMBL
    A0A6I8NAR2
    Related
    ENSOANP00000038257.1
    Conserved Domains (2) summary
    pfam00151
    Location:33 → 362
    Lipase
    cl00011
    Location:365 → 500
    PLAT; PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and ...
Nucleotide Protein
Heading Accession and Version

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