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TOR1AIP1 torsin 1A interacting protein 1 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100085448, updated on 30-Apr-2024

Summary

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Gene symbol
TOR1AIP1
Gene description
torsin 1A interacting protein 1
See related
Ensembl:ENSOANG00000041425
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See TOR1AIP1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
13
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 16 NC_041743.1 (9107452..9128089)

Chromosome 16 - NC_041743.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 163 member A Neighboring gene ADAMTS-like protein 2 Neighboring gene torsin 1A interacting protein 2 Neighboring gene centrosomal protein 350 Neighboring gene uncharacterized LOC103170518

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041743.1 Chromosome 16 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 1
Names
torsin A interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041743.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    9107452..9128089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029081160.2 → XP_028936993.1  torsin-1A-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6I8NKL5
    Related
    ENSOANP00000041673.1
    Conserved Domains (2) summary
    PHA03307
    Location:1 → 288
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam05609
    Location:158 → 641
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_029081162.2 → XP_028936995.1  torsin-1A-interacting protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A6I8PNV4
    Related
    ENSOANP00000053979.1
    Conserved Domains (2) summary
    PHA03307
    Location:1 → 285
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam05609
    Location:158 → 622
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_029081161.2 → XP_028936994.1  torsin-1A-interacting protein 1 isoform X2

    Conserved Domains (2) summary
    PHA03307
    Location:1 → 287
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam05609
    Location:158 → 640
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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