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COG6 component of oligomeric golgi complex 6 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100081908, updated on 30-Apr-2024

Summary

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Gene symbol
COG6
Gene description
component of oligomeric golgi complex 6
See related
Ensembl:ENSOANG00000015513
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See COG6 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
20
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 20 NC_041747.1 (6594541..6669056)

Chromosome 20 - NC_041747.1Genomic Context describing neighboring genes Neighboring gene proline and serine rich 1 Neighboring gene NHL repeat containing 3 Neighboring gene LHFPL tetraspan subfamily member 6 Neighboring gene uncharacterized LOC114805816 Neighboring gene uncharacterized LOC114805877

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041747.1 Chromosome 20 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041747.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    6594541..6669056
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039915014.1 → XP_039770948.1  conserved oligomeric Golgi complex subunit 6 isoform X2

    UniProtKB/TrEMBL
    F6X1X2
    Conserved Domains (1) summary
    smart01087
    Location:64 → 606
    COG6; Conserved oligomeric complex COG6

  2. XM_001512585.6 → XP_001512635.3  conserved oligomeric Golgi complex subunit 6 isoform X1

    UniProtKB/TrEMBL
    A0A6I8NVM9, F6X1X2
    Related
    ENSOANP00000045177.1
    Conserved Domains (1) summary
    pfam06419
    Location:52 → 648
    COG6; Conserved oligomeric complex COG6
Nucleotide Protein
Heading Accession and Version

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