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TGDS TDP-glucose 4,6-dehydratase [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100081325, updated on 30-Apr-2024

Summary

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Gene symbol
TGDS
Gene description
TDP-glucose 4,6-dehydratase
See related
Ensembl:ENSOANG00000014920
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See TGDS in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 10 NC_041737.1 (20536047..20555794)

Chromosome 10 - NC_041737.1Genomic Context describing neighboring genes Neighboring gene SRY-box transcription factor 21 Neighboring gene G protein-coupled receptor 180 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene dopachrome tautomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041737.1 Chromosome 10 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dTDP-glucose 4,6-dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-sugar metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dTDP-D-glucose 4,6-dehydratase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041737.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    20536047..20555794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001512089.4 → XP_001512139.2  dTDP-D-glucose 4,6-dehydratase isoform X1

    UniProtKB/TrEMBL
    A0A6I8NAK2, F6V878
    Related
    ENSOANP00000023488.2, ENSOANT00000023492.4
    Conserved Domains (2) summary
    cd05246
    Location:17 → 335
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs
    COG1088
    Location:17 → 339
    RfbB; dTDP-D-glucose 4,6-dehydratase [Cell wall/membrane/envelope biogenesis]

  2. XM_029074171.1 → XP_028930004.1  dTDP-D-glucose 4,6-dehydratase isoform X2

    UniProtKB/TrEMBL
    A0A6I8NAK2
    Conserved Domains (1) summary
    cd05246
    Location:17 → 314
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials