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CHGA chromogranin A [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100079747, updated on 30-Apr-2024

Summary

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Gene symbol
CHGA
Gene description
chromogranin A
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See CHGA in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 1 NC_041728.1 (53465662..53480461)

Chromosome 1 - NC_041728.1Genomic Context describing neighboring genes Neighboring gene legumain Neighboring gene golgin A5 Neighboring gene inositol-tetrakisphosphate 1-kinase Neighboring gene small nucleolar RNA SNORA7 Neighboring gene lysosomal enzyme trafficking factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041728.1 Chromosome 1 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of catecholamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of insulin secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromaffin granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromogranin-A
Names
chromogranin A (parathyroid secretory protein 1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041728.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    53465662..53480461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039911843.1 → XP_039767777.1  chromogranin-A isoform X1

    UniProtKB/TrEMBL
    F7CR56
    Conserved Domains (1) summary
    pfam01271
    Location:29 → 474
    Granin; Granin (chromogranin or secretogranin)

  2. XM_029076278.1 → XP_028932111.1  chromogranin-A isoform X2

    UniProtKB/TrEMBL
    F7CR56
    Conserved Domains (1) summary
    pfam01271
    Location:29 → 473
    Granin; Granin (chromogranin or secretogranin)

  3. XM_007669344.3 → XP_007667534.1  chromogranin-A isoform X3

    UniProtKB/TrEMBL
    F7CR56
    Conserved Domains (1) summary
    pfam01271
    Location:26 → 471
    Granin; Granin (chromogranin or secretogranin)
Nucleotide Protein
Heading Accession and Version

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