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SLC35C1 solute carrier family 35 member C1 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100075938, updated on 30-Apr-2024

Summary

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Gene symbol
SLC35C1
Gene description
solute carrier family 35 member C1
See related
Ensembl:ENSOANG00000005349
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See SLC35C1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 3 NC_041730.1 (22704025..22717009, complement)

Chromosome 3 - NC_041730.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 8 interacting protein 1 Neighboring gene cryptochrome circadian regulator 2 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041730.1 Chromosome 3 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-fucose import into Golgi lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose transporter 1
Names
solute carrier family 35 (GDP-fucose transporter), member C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041730.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    22704025..22717009 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029060896.2 → XP_028916729.1  GDP-fucose transporter 1 isoform X2

    Conserved Domains (1) summary
    cl26744
    Location:28 → 292
    TPT; Triose-phosphate Transporter family

  2. XM_029060898.2 → XP_028916731.1  GDP-fucose transporter 1 isoform X2

    Conserved Domains (1) summary
    cl26744
    Location:28 → 292
    TPT; Triose-phosphate Transporter family

  3. XM_029060895.2 → XP_028916728.1  GDP-fucose transporter 1 isoform X1

    UniProtKB/TrEMBL
    F6X864
    Related
    ENSOANP00000008516.2
    Conserved Domains (1) summary
    cl26744
    Location:41 → 305
    TPT; Triose-phosphate Transporter family
Nucleotide Protein
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