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ATRN attractin [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100074877, updated on 30-Apr-2024

Summary

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Gene symbol
ATRN
Gene description
attractin
See related
Ensembl:ENSOANG00000000438
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See ATRN in Genome Data Viewer
Location:
chromosome: 4
Exon count:
30
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 4 NC_041731.1 (21758849..21892294)

Chromosome 4 - NC_041731.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 4 member 11 Neighboring gene small nucleolar RNA SNORA7 Neighboring gene dynein axonemal assembly factor 9 Neighboring gene GDNF family receptor alpha 4 Neighboring gene disintegrin and metalloproteinase domain-containing protein 33-like Neighboring gene ADAM metallopeptidase domain 33

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041731.1 Chromosome 4 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
attractin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041731.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    21758849..21892294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029062687.2 → XP_028918520.2  attractin isoform X1

    UniProtKB/TrEMBL
    A0A6I8NTP4
    Conserved Domains (6) summary
    PHA03098
    Location:314 → 563
    PHA03098; kelch-like protein; Provisional
    cd00041
    Location:89 → 204
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00054
    Location:57 → 87
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:1019 → 1064
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    sd00038
    Location:511 → 564
    Kelch; KELCH repeat [structural motif]
    cl02432
    Location:745 → 877
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  2. XM_039911728.1 → XP_039767662.1  attractin isoform X2

    UniProtKB/TrEMBL
    F7FYQ6
    Conserved Domains (6) summary
    PHA03098
    Location:314 → 563
    PHA03098; kelch-like protein; Provisional
    cd00041
    Location:89 → 204
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00054
    Location:57 → 87
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:1019 → 1064
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    sd00038
    Location:511 → 564
    Kelch; KELCH repeat [structural motif]
    cl02432
    Location:745 → 877
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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