U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ACOT12 acyl-CoA thioesterase 12 [ Equus caballus (horse) ]

Gene ID: 100073251, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
ACOT12provided by VGNC
Official Full Name
acyl-CoA thioesterase 12provided by VGNC
Primary source
VGNC:VGNC:14989
See related
Ensembl:ENSECAG00000021196
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ACOT12 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 14 NC_009157.3 (85076797..85126436)

Chromosome 14 - NC_009157.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111767899 Neighboring gene single stranded DNA binding protein 2 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC111767900 Neighboring gene uncharacterized LOC111767901 Neighboring gene zinc finger CCHC-type containing 9 Neighboring gene creatine kinase, mitochondrial 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_009157.3 Chromosome 14 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
acetyl-coenzyme A thioesterase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009157.3 Reference EquCab3.0 Primary Assembly

    Range
    85076797..85126436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023618072.1 → XP_023473840.1  acetyl-coenzyme A thioesterase isoform X1

    UniProtKB/TrEMBL
    F6Q0I6
    Related
    ENSECAP00000018975.3, ENSECAT00000022933.4
    Conserved Domains (2) summary
    cd03442
    Location:3 → 118
    BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...
    cl14643
    Location:311 → 546
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily

  2. XM_023618073.1 → XP_023473841.1  acetyl-coenzyme A thioesterase isoform X2

    UniProtKB/TrEMBL
    F6Q0I6
    Conserved Domains (2) summary
    cd03442
    Location:164 → 284
    BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...
    cl14643
    Location:294 → 529
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.