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HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 [ Equus caballus (horse) ]

Gene ID: 100073112, updated on 15-Aug-2024

Summary

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Gene symbol
HS3ST3A1
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 3A1
See related
Ensembl:ENSECAG00000025171
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human all
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Genomic context

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See HS3ST3A1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (56017895..56108621, complement)

Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene elaC ribonuclease Z 2 Neighboring gene uncharacterized LOC111775740 Neighboring gene uncharacterized LOC106781334 Neighboring gene cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009154.3 Chromosome 11 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009154.3 Reference EquCab3.0 Primary Assembly

    Range
    56017895..56108621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001918178.5 → XP_001918213.4  heparan sulfate glucosamine 3-O-sulfotransferase 3A1

    UniProtKB/TrEMBL
    F6SM58
    Related
    ENSECAP00000022744.2, ENSECAT00000027183.3
    Conserved Domains (1) summary
    pfam00685
    Location:152 → 389
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
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